Amycolatopsis tolypomycina strain DSM 44544

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis tolypomycina strain DSM 44544 is a mesophilic actinobacterium characterized by its motility, as it possesses flagella. The optimal growth temperature for this strain is 29°C, which positions it within the mesophilic temperature range. This strain is notable for its genetic simplicity, having a single replicon, which may influence its replication and genetic stability. In terms of reproductive strategy, Amycolatopsis tolypomycina strain DSM 44544 does not form spores, which is a distinctive feature among many bacteria. This trait suggests a reliance on other mechanisms for survival and propagation in its natural environment. The strain is cataloged with the accession number FNSO00000000.1, which facilitates its identification and classification within microbial databases. The presence of flagella indicates that this bacterium can exhibit motility, allowing it to navigate its environment, potentially aiding in nutrient acquisition or evasion from unfavorable conditions. The combination of its mesophilic nature and motility may allow Amycolatopsis tolypomycina strain DSM 44544 to thrive in various terrestrial ecosystems where moderate temperatures prevail. Understanding the ecological role of such bacteria can provide insights into nutrient cycling and soil health, highlighting their importance in the microbiome of terrestrial habitats.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis tolypomycina
Strainstrain DSM 44544

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis tolypomycina strain DSM 44544 genome assembly,

Gene Summary

Adenine Count

1468247 bp

Thymine Count

1467249 bp

Guanine Count

3705625 bp

Cytosine Count

3722310 bp

Genome Length

10363431 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vii secretion integral membrane protein eccdSAMN04489727_2973Not AvailablePositive3044679 - 304604945553.4
glucuronoarabinoxylan endo-1,4-beta-xylanaseSAMN04489727_2974Not AvailablePositive3046172 - 304744045996.3
type vii secretion protein ecceSAMN04489727_2975Not AvailableNegative3047443 - 304848336537.2
type vii secretion protein eccbSAMN04489727_2976Not AvailablePositive3048625 - 305004647582.9
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN04489727_2977Not AvailablePositive3050043 - 305075325030.4
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN04489727_2978Not AvailablePositive3050750 - 305137922684.4
predicted amidohydrolaseSAMN04489727_2979Not AvailableNegative3051461 - 305225527282.3
histidinol dehydrogenaseSAMN04489727_2980Not AvailablePositive3052340 - 305366545889.5
histidinol-phosphate aminotransferaseSAMN04489727_2981Not AvailablePositive3053662 - 305476239223.4
imidazoleglycerol-phosphate dehydrataseSAMN04489727_2982Not AvailablePositive3054759 - 305535821592.6

Displaying genes 2931 – 2940 of 9382 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.