Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis tolypomycina |
| Strain | strain DSM 44544 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1468247 bp
Thymine Count
1467249 bp
Guanine Count
3705625 bp
Cytosine Count
3722310 bp
Genome Length
10363431 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN04489727_1871 | Not Available | Positive | 1893605 - 1894210 | 22420.9 |
| hypothetical protein | SAMN04489727_1872 | Not Available | Positive | 1894207 - 1894680 | 16912.2 |
| polysaccharide deacetylase | SAMN04489727_1873 | Not Available | Negative | 1894677 - 1895432 | 27502.9 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04489727_1874 | Not Available | Negative | 1895549 - 1895998 | 16338.7 |
| uncharacterized membrane protein yccc | SAMN04489727_1875 | Not Available | Positive | 1896067 - 1898034 | 68729.0 |
| mt0933-like antitoxin protein | SAMN04489727_1876 | Not Available | Positive | 1898031 - 1898264 | 8569.91 |
| prephenate dehydrogenase | SAMN04489727_1877 | Not Available | Negative | 1898265 - 1899233 | 32712.0 |
| 2,4-dienoyl-coa reductase (nadph2) | SAMN04489727_1878 | Not Available | Negative | 1899269 - 1901281 | 71674.2 |
| dna-binding transcriptional regulator, padr family | SAMN04489727_1879 | Not Available | Negative | 1901278 - 1901823 | 20281.3 |
| predicted phospholipase, patatin/cpla2 family | SAMN04489727_1880 | Not Available | Positive | 1901949 - 1902878 | 33343.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
