Rhodobacter sp. 24-YEA-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 24-YEA-8 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait allows it to navigate its environment, potentially aiding in nutrient acquisition and adaptation to varying ecological niches. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. The genome of Rhodobacter sp. 24-YEA-8 is accessible under the accession number FNSK00000000.1, providing a basis for further research into its genetic makeup and functional capabilities. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, as bacteria with fewer replicons often display certain metabolic efficiencies. In ecological terms, the motility conferred by flagella may allow Rhodobacter sp. 24-YEA-8 to thrive in diverse environments, such as aquatic ecosystems where it can engage in photosynthesis and play a role in nutrient cycling. The ability to move toward favorable conditions can enhance its survival and reproductive success. Overall, the traits of Rhodobacter sp. 24-YEA-8 suggest it has specific adaptations that allow it to occupy a niche within its ecosystem, highlighting the importance of motility and genomic organization in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 24-YEA-8 genome assembly, contig: Ga0131992_17,

Gene Summary

Adenine Count

932037 bp

Thymine Count

936635 bp

Guanine Count

1573254 bp

Cytosine Count

1569814 bp

Genome Length

5011740 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane receptor for ferrienterochelin and colicinsSAMN05519105_4678Not AvailablePositive4799254 - 480141977300.8
fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase familySAMN05519105_4679Not AvailableNegative4801454 - 480276147856.1
outer membrane receptor proteins, mostly fe transportSAMN05519105_4680Not AvailableNegative4802832 - 480491676669.8
transcriptional regulator, iclr familySAMN05519105_4681Not AvailablePositive4805113 - 480591628631.6
iron complex transport system atp-binding proteinSAMN05519105_4682Not AvailableNegative4805907 - 480670128856.2
nadph-dependent ferric siderophore reductase, contains fad-binding and sip domainsSAMN05519105_4683Not AvailablePositive4806910 - 480777331565.9
iron complex transport system substrate-binding proteinSAMN05519105_4684Not AvailablePositive4807794 - 480873232948.4
iron complex transport system permease proteinSAMN05519105_4685Not AvailablePositive4808729 - 480974233904.4
iron complex transport system permease proteinSAMN05519105_4686Not AvailablePositive4809763 - 481077934634.7
dna repair exonuclease sbccd nuclease subunitSAMN05519105_4687Not AvailablePositive4811029 - 481215340266.9

Displaying genes 4481 – 4490 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.