Rhodobacter sp. 24-YEA-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 24-YEA-8 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait allows it to navigate its environment, potentially aiding in nutrient acquisition and adaptation to varying ecological niches. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. The genome of Rhodobacter sp. 24-YEA-8 is accessible under the accession number FNSK00000000.1, providing a basis for further research into its genetic makeup and functional capabilities. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, as bacteria with fewer replicons often display certain metabolic efficiencies. In ecological terms, the motility conferred by flagella may allow Rhodobacter sp. 24-YEA-8 to thrive in diverse environments, such as aquatic ecosystems where it can engage in photosynthesis and play a role in nutrient cycling. The ability to move toward favorable conditions can enhance its survival and reproductive success. Overall, the traits of Rhodobacter sp. 24-YEA-8 suggest it has specific adaptations that allow it to occupy a niche within its ecosystem, highlighting the importance of motility and genomic organization in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 24-YEA-8 genome assembly, contig: Ga0131992_17,

Gene Summary

Adenine Count

932037 bp

Thymine Count

936635 bp

Guanine Count

1573254 bp

Cytosine Count

1569814 bp

Genome Length

5011740 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-lactate dehydrogenase (cytochrome)SAMN05519105_4510Not AvailableNegative4627517 - 462862339864.4
fad/fmn-containing dehydrogenaseSAMN05519105_4511Not AvailableNegative4628667 - 463015453135.3
putative spermidine/putrescine transport system substrate-binding proteinSAMN05519105_4512Not AvailableNegative4630276 - 463133738955.0
putative spermidine/putrescine transport system atp-binding proteinSAMN05519105_4513Not AvailableNegative4631365 - 463251641955.8
putative spermidine/putrescine transport system permease proteinSAMN05519105_4514Not AvailableNegative4632513 - 463332229516.4
mannopine transport system permease proteinSAMN05519105_4515Not AvailableNegative4633319 - 463417030909.1
transcriptional regulator, xre family with cupin sensorSAMN05519105_4516Not AvailableNegative4634288 - 463488721433.6
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenaseSAMN05519105_4517Not AvailablePositive4635055 - 463654853277.8
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05519105_4518Not AvailablePositive4636561 - 463746631292.0
glycine/d-amino acid oxidaseSAMN05519105_4519Not AvailablePositive4637475 - 463875845299.6

Displaying genes 4321 – 4330 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.