Rhodobacter sp. 24-YEA-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 24-YEA-8 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait allows it to navigate its environment, potentially aiding in nutrient acquisition and adaptation to varying ecological niches. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. The genome of Rhodobacter sp. 24-YEA-8 is accessible under the accession number FNSK00000000.1, providing a basis for further research into its genetic makeup and functional capabilities. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, as bacteria with fewer replicons often display certain metabolic efficiencies. In ecological terms, the motility conferred by flagella may allow Rhodobacter sp. 24-YEA-8 to thrive in diverse environments, such as aquatic ecosystems where it can engage in photosynthesis and play a role in nutrient cycling. The ability to move toward favorable conditions can enhance its survival and reproductive success. Overall, the traits of Rhodobacter sp. 24-YEA-8 suggest it has specific adaptations that allow it to occupy a niche within its ecosystem, highlighting the importance of motility and genomic organization in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 24-YEA-8 genome assembly, contig: Ga0131992_17,

Gene Summary

Adenine Count

932037 bp

Thymine Count

936635 bp

Guanine Count

1573254 bp

Cytosine Count

1569814 bp

Genome Length

5011740 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferrochelataseSAMN05519105_0309Not AvailablePositive303290 - 30434239107.8
hypothetical proteinSAMN05519105_0310Not AvailableNegative304547 - 3047235631.01
l,d-transpeptidase catalytic domainSAMN05519105_0311Not AvailableNegative304868 - 30547022193.3
cysteine-rich secretory protein family proteinSAMN05519105_0312Not AvailablePositive305733 - 30625118846.4
l,d-transpeptidase catalytic domainSAMN05519105_0313Not AvailableNegative306352 - 30685218763.9
23s rrna m(5)u-1939 methyltransferaseSAMN05519105_0314Not AvailableNegative306950 - 30818543749.2
atp-binding cassette, subfamily bSAMN05519105_0315Not AvailableNegative308178 - 31004067070.3
atp-binding cassette, subfamily b, multidrug efflux pumpSAMN05519105_0316Not AvailableNegative310037 - 31189367988.6
poly(a) polymeraseSAMN05519105_0317Not AvailableNegative311954 - 31310540637.5
nudix domain-containing proteinSAMN05519105_0318Not AvailableNegative313119 - 31373922261.8

Displaying genes 421 – 430 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.