Rhodobacter sp. 24-YEA-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 24-YEA-8 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait allows it to navigate its environment, potentially aiding in nutrient acquisition and adaptation to varying ecological niches. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. The genome of Rhodobacter sp. 24-YEA-8 is accessible under the accession number FNSK00000000.1, providing a basis for further research into its genetic makeup and functional capabilities. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, as bacteria with fewer replicons often display certain metabolic efficiencies. In ecological terms, the motility conferred by flagella may allow Rhodobacter sp. 24-YEA-8 to thrive in diverse environments, such as aquatic ecosystems where it can engage in photosynthesis and play a role in nutrient cycling. The ability to move toward favorable conditions can enhance its survival and reproductive success. Overall, the traits of Rhodobacter sp. 24-YEA-8 suggest it has specific adaptations that allow it to occupy a niche within its ecosystem, highlighting the importance of motility and genomic organization in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 24-YEA-8 genome assembly, contig: Ga0131992_17,

Gene Summary

Adenine Count

932037 bp

Thymine Count

936635 bp

Guanine Count

1573254 bp

Cytosine Count

1569814 bp

Genome Length

5011740 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine transport system substrate-binding proteinSAMN05519105_4389Not AvailablePositive4491998 - 449312841469.9
spermidine/putrescine transport system atp-binding proteinSAMN05519105_4390Not AvailablePositive4493205 - 449429340146.6
spermidine/putrescine transport system permease proteinSAMN05519105_4391Not AvailablePositive4494280 - 449513431015.3
spermidine/putrescine transport system permease proteinSAMN05519105_4392Not AvailablePositive4495131 - 449592529216.8
3-oxoacyl-[acyl-carrier protein] reductaseSAMN05519105_4393Not AvailablePositive4495965 - 449674426969.5
ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonistSAMN05519105_4394Not AvailablePositive4496756 - 449776337649.8
threonine/homoserine efflux transporter rhtaSAMN05519105_4396Not AvailableNegative4498297 - 449918731269.5
transcriptional regulator, lysr familySAMN05519105_4397Not AvailablePositive4499286 - 450012530177.7
molybdenum cofactor cytidylyltransferaseSAMN05519105_4398Not AvailableNegative4500556 - 450116721395.8
xanthine dehydrogenase accessory factorSAMN05519105_4399Not AvailableNegative4501164 - 450208732726.5

Displaying genes 4211 – 4220 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.