Rhodobacter sp. 24-YEA-8

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 24-YEA-8 is a rod-shaped bacterium characterized by the presence of flagella, which suggests motility. This trait allows it to navigate its environment, potentially aiding in nutrient acquisition and adaptation to varying ecological niches. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in replication. The genome of Rhodobacter sp. 24-YEA-8 is accessible under the accession number FNSK00000000.1, providing a basis for further research into its genetic makeup and functional capabilities. The presence of a single replicon can be indicative of the organism's evolutionary adaptations, as bacteria with fewer replicons often display certain metabolic efficiencies. In ecological terms, the motility conferred by flagella may allow Rhodobacter sp. 24-YEA-8 to thrive in diverse environments, such as aquatic ecosystems where it can engage in photosynthesis and play a role in nutrient cycling. The ability to move toward favorable conditions can enhance its survival and reproductive success. Overall, the traits of Rhodobacter sp. 24-YEA-8 suggest it has specific adaptations that allow it to occupy a niche within its ecosystem, highlighting the importance of motility and genomic organization in microbial ecology.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 24-YEA-8 genome assembly, contig: Ga0131992_17,

Gene Summary

Adenine Count

932037 bp

Thymine Count

936635 bp

Guanine Count

1573254 bp

Cytosine Count

1569814 bp

Genome Length

5011740 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exopolysaccharide biosynthesis protein ybjhSAMN05519105_0299Not AvailableNegative292933 - 29508078909.7
ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epscSAMN05519105_0300Not AvailableNegative295174 - 29715972099.3
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN05519105_0301Not AvailableNegative297196 - 29780723544.1
nad dependent epimerase/dehydratase family proteinSAMN05519105_0302Not AvailableNegative297811 - 29870130624.4
polysaccharide export outer membrane proteinSAMN05519105_0303Not AvailablePositive298817 - 29995939387.1
transcriptional regulator, marr familySAMN05519105_0304Not AvailableNegative299988 - 30043416568.0
predicted amidohydrolaseSAMN05519105_0305Not AvailableNegative300431 - 30127330252.8
glutaredoxin 3SAMN05519105_0306Not AvailableNegative301273 - 3015309334.29
predicted amidophosphoribosyltransferasesSAMN05519105_0307Not AvailableNegative301566 - 30234827129.2
hypothetical proteinSAMN05519105_0308Not AvailablePositive302396 - 30321730032.2

Displaying genes 411 – 420 of 4651 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.