Nocardioides exalbidus strain DSM 22017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides exalbidus strain DSM 22017 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and metabolic efficiency. The strain is documented under the accession number FNRT00000000.1, which serves as a unique identifier for its genomic sequence in various biological databases. As a member of the genus Nocardioides, this strain falls within a group known for their role in the degradation of complex organic compounds, particularly within soil ecosystems. This capacity suggests that N. exalbidus DSM 22017 may play an important role in biogeochemical cycles, particularly in the breakdown of pollutants and organic matter. Such activities are crucial for nutrient cycling and the maintenance of soil health. The ecological insights provided by studying Nocardioides exalbidus DSM 22017 highlight its potential utility in bioremediation efforts, where microorganisms are employed to detoxify contaminated environments. Understanding its genomic features and metabolic capabilities can help researchers harness its properties for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides exalbidus
Strainstrain DSM 22017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides exalbidus strain DSM 22017 genome assembly, contig:

Gene Summary

Adenine Count

648125 bp

Thymine Count

650887 bp

Guanine Count

1655462 bp

Cytosine Count

1645375 bp

Genome Length

4599849 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04489844_0902Not AvailableNegative940271 - 9404325893.85
cold-shock dna-binding protein familySAMN04489844_0903Not AvailableNegative940625 - 9408287406.52
microcystin degradation protein mlrc, contains duf1485 domainSAMN04489844_0904Not AvailablePositive941113 - 94261252656.7
copper homeostasis proteinSAMN04489844_0905Not AvailableNegative942609 - 94335825240.0
universal stress protein family proteinSAMN04489844_0906Not AvailablePositive943431 - 94380512553.0
carbonic anhydrase or acetyltransferase, isoleucine patch superfamilySAMN04489844_0907Not AvailablePositive943805 - 94432017314.4
hypothetical proteinSAMN04489844_0908Not AvailableNegative944340 - 94485818901.5
rna polymerase sigma-70 factor, ecf subfamilySAMN04489844_0909Not AvailableNegative944855 - 94546923188.7
uncharacterized conserved protein ylou, alkaline shock protein (asp23) familySAMN04489844_0910Not AvailablePositive945665 - 94615616432.1
hypothetical proteinSAMN04489844_0911Not AvailablePositive946475 - 94677711821.2

Displaying genes 891 – 900 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.