Nocardioides exalbidus strain DSM 22017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides exalbidus strain DSM 22017 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and metabolic efficiency. The strain is documented under the accession number FNRT00000000.1, which serves as a unique identifier for its genomic sequence in various biological databases. As a member of the genus Nocardioides, this strain falls within a group known for their role in the degradation of complex organic compounds, particularly within soil ecosystems. This capacity suggests that N. exalbidus DSM 22017 may play an important role in biogeochemical cycles, particularly in the breakdown of pollutants and organic matter. Such activities are crucial for nutrient cycling and the maintenance of soil health. The ecological insights provided by studying Nocardioides exalbidus DSM 22017 highlight its potential utility in bioremediation efforts, where microorganisms are employed to detoxify contaminated environments. Understanding its genomic features and metabolic capabilities can help researchers harness its properties for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides exalbidus
Strainstrain DSM 22017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides exalbidus strain DSM 22017 genome assembly, contig:

Gene Summary

Adenine Count

648125 bp

Thymine Count

650887 bp

Guanine Count

1655462 bp

Cytosine Count

1645375 bp

Genome Length

4599849 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04489844_0600Not AvailablePositive630449 - 63100920786.1
uncharacterized membrane protein yjjp, duf1212 familySAMN04489844_0601Not AvailableNegative630984 - 63238748755.0
carboxylate-amine ligaseSAMN04489844_0602Not AvailablePositive632468 - 63361342110.2
diacylglycerol o-acyltransferaseSAMN04489844_0603Not AvailablePositive633701 - 63510450551.2
adenine-specific dna-methyltransferaseSAMN04489844_0604Not AvailableNegative635123 - 63634644227.1
predicted proteinSAMN04489844_0605Not AvailablePositive636449 - 63789750407.4
hypothetical proteinSAMN04489844_0606Not AvailableNegative637902 - 63851019796.7
ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase)SAMN04489844_0607Not AvailablePositive638557 - 63956736879.2
ca2+:h+ antiporterSAMN04489844_0608Not AvailablePositive639603 - 64074238848.3
amino acid abc transporter substrate-binding protein, paat familySAMN04489844_0609Not AvailableNegative640922 - 64172828336.1

Displaying genes 591 – 600 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.