Nocardioides exalbidus strain DSM 22017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides exalbidus strain DSM 22017 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and metabolic efficiency. The strain is documented under the accession number FNRT00000000.1, which serves as a unique identifier for its genomic sequence in various biological databases. As a member of the genus Nocardioides, this strain falls within a group known for their role in the degradation of complex organic compounds, particularly within soil ecosystems. This capacity suggests that N. exalbidus DSM 22017 may play an important role in biogeochemical cycles, particularly in the breakdown of pollutants and organic matter. Such activities are crucial for nutrient cycling and the maintenance of soil health. The ecological insights provided by studying Nocardioides exalbidus DSM 22017 highlight its potential utility in bioremediation efforts, where microorganisms are employed to detoxify contaminated environments. Understanding its genomic features and metabolic capabilities can help researchers harness its properties for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides exalbidus
Strainstrain DSM 22017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides exalbidus strain DSM 22017 genome assembly, contig:

Gene Summary

Adenine Count

648125 bp

Thymine Count

650887 bp

Guanine Count

1655462 bp

Cytosine Count

1645375 bp

Genome Length

4599849 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminopimelate decarboxylaseSAMN04489844_0540Not AvailableNegative561063 - 56230143519.1
acyl-coa ligase (amp-forming), exosortase a-associatedSAMN04489844_0541Not AvailableNegative562298 - 56391758197.5
hypothetical proteinSAMN04489844_0542Not AvailableNegative563902 - 56477432868.4
hypothetical proteinSAMN04489844_0543Not AvailablePositive564924 - 56586233921.0
o-antigen ligaseSAMN04489844_0544Not AvailablePositive565859 - 56716645894.0
hypothetical proteinSAMN04489844_0545Not AvailableNegative567141 - 56873357798.3
polysaccharide transporter, pst familySAMN04489844_0546Not AvailableNegative568730 - 57020851541.3
ig-like domain-containing proteinSAMN04489844_0547Not AvailableNegative570255 - 575006163883.0
glycosyltransferase family 28 c-terminal domain-containing proteinSAMN04489844_0548Not AvailableNegative575116 - 57612636275.9
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04489844_0549Not AvailableNegative576123 - 57725339246.7

Displaying genes 531 – 540 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.