Nocardioides exalbidus strain DSM 22017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides exalbidus strain DSM 22017 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and metabolic efficiency. The strain is documented under the accession number FNRT00000000.1, which serves as a unique identifier for its genomic sequence in various biological databases. As a member of the genus Nocardioides, this strain falls within a group known for their role in the degradation of complex organic compounds, particularly within soil ecosystems. This capacity suggests that N. exalbidus DSM 22017 may play an important role in biogeochemical cycles, particularly in the breakdown of pollutants and organic matter. Such activities are crucial for nutrient cycling and the maintenance of soil health. The ecological insights provided by studying Nocardioides exalbidus DSM 22017 highlight its potential utility in bioremediation efforts, where microorganisms are employed to detoxify contaminated environments. Understanding its genomic features and metabolic capabilities can help researchers harness its properties for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides exalbidus
Strainstrain DSM 22017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides exalbidus strain DSM 22017 genome assembly, contig:

Gene Summary

Adenine Count

648125 bp

Thymine Count

650887 bp

Guanine Count

1655462 bp

Cytosine Count

1645375 bp

Genome Length

4599849 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts system n-acetylglucosamine-specific iib component, glc familySAMN04489844_0448Not AvailableNegative464060 - 4642937820.34
pts system n-acetylglucosamine-specific iic component, glc familySAMN04489844_0450Not AvailablePositive465218 - 46648944889.3
n-acetylglucosamine-6-phosphate deacetylaseSAMN04489844_0451Not AvailablePositive466491 - 46762138216.7
carbohydrate abc transporter membrane protein 2, cut1 familySAMN04489844_0452Not AvailableNegative467659 - 46858534184.9
carbohydrate abc transporter membrane protein 1, cut1 familySAMN04489844_0453Not AvailableNegative468582 - 46952335090.4
carbohydrate abc transporter substrate-binding protein, cut1 familySAMN04489844_0454Not AvailableNegative469527 - 47085547105.7
beta-galactosidaseSAMN04489844_0455Not AvailablePositive471023 - 47304473725.4
dna-binding transcriptional regulator of sugar metabolism, deor/glpr familySAMN04489844_0456Not AvailablePositive473044 - 47385328067.6
alpha-galactosidaseSAMN04489844_0457Not AvailablePositive473850 - 47598276737.0
carbohydrate binding module (family 6)SAMN04489844_0458Not AvailableNegative476042 - 480808167419.0

Displaying genes 441 – 450 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.