Nocardioides exalbidus strain DSM 22017

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides exalbidus strain DSM 22017 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and metabolic efficiency. The strain is documented under the accession number FNRT00000000.1, which serves as a unique identifier for its genomic sequence in various biological databases. As a member of the genus Nocardioides, this strain falls within a group known for their role in the degradation of complex organic compounds, particularly within soil ecosystems. This capacity suggests that N. exalbidus DSM 22017 may play an important role in biogeochemical cycles, particularly in the breakdown of pollutants and organic matter. Such activities are crucial for nutrient cycling and the maintenance of soil health. The ecological insights provided by studying Nocardioides exalbidus DSM 22017 highlight its potential utility in bioremediation efforts, where microorganisms are employed to detoxify contaminated environments. Understanding its genomic features and metabolic capabilities can help researchers harness its properties for environmental applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides exalbidus
Strainstrain DSM 22017

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides exalbidus strain DSM 22017 genome assembly, contig:

Gene Summary

Adenine Count

648125 bp

Thymine Count

650887 bp

Guanine Count

1655462 bp

Cytosine Count

1645375 bp

Genome Length

4599849 bp

Protein-coding Genes

4332 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferaseSAMN04489844_0347Not AvailablePositive366654 - 36759232226.6
hypothetical proteinSAMN04489844_0348Not AvailablePositive367601 - 36856634512.0
3-hydroxyisobutyrate dehydrogenaseSAMN04489844_0349Not AvailableNegative368714 - 36955628775.1
succinyldiaminopimelate transaminaseSAMN04489844_0350Not AvailableNegative369628 - 37073438890.1
nad-dependent dihydropyrimidine dehydrogenase, prea subunitSAMN04489844_0351Not AvailableNegative370731 - 37105712044.0
acetyltransferase (gnat) family proteinSAMN04489844_0352Not AvailablePositive371122 - 37207233933.9
uncharacterized hydrophobic domain-containing proteinSAMN04489844_0353Not AvailableNegative372054 - 37302233612.5
aspartyl-trna synthetaseSAMN04489844_0354Not AvailablePositive373271 - 37453946363.0
vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domainsSAMN04489844_0355Not AvailableNegative374540 - 37629162084.9
hypothetical proteinSAMN04489844_0356Not AvailableNegative376310 - 37666311758.6

Displaying genes 341 – 350 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.