Bacteroides xylanisolvens strain NLAE-zl-G339

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides xylanisolvens strain NLAE-zl-G339 is a Gram-negative, anaerobic, rod-shaped bacterium predominantly found in the gut of humans, specifically in human feces and the large intestine. This strain demonstrates a flagellated structure, which likely aids in its mobility within the anaerobic environment of the gut. As an anaerobe, Bacteroides xylanisolvens plays a significant role in the complex microbial ecosystem of the human digestive tract. Its ability to thrive in oxygen-depleted conditions is crucial, as the large intestine is a habitat characterized by low oxygen levels. The presence of only one replicon suggests a streamlined genomic organization, which may facilitate efficient metabolic processes and adaptation to its specific ecological niche. This strain's association with Homo sapiens highlights its potential contribution to human health, particularly in the context of gut microbiota composition and function. Bacteroides species are known to be involved in the fermentation of dietary fibers, producing short-chain fatty acids that can have beneficial effects on host metabolism and immune function. Therefore, Bacteroides xylanisolvens strain NLAE-zl-G339 may be integral to maintaining gut health and influencing overall well-being through its metabolic activities and interactions within the gut microbiome.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides xylanisolvens
Strainstrain NLAE-zl-G339

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides xylanisolvens strain NLAE-zl-G339
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut; human feces; large intestine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides xylanisolvens strain NLAE-zl-G339 genome assembly,

Gene Summary

Adenine Count

1767470 bp

Thymine Count

1803791 bp

Guanine Count

1298198 bp

Cytosine Count

1262169 bp

Genome Length

6131743 bp

Protein-coding Genes

4830 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i restriction enzyme, r subunitSAMN04487924_10273Not AvailableNegative619486 - 622713124149.0
type i restriction enzyme, s subunitSAMN04487924_10274Not AvailableNegative622726 - 62384442761.0
predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 familySAMN04487924_10275Not AvailableNegative623848 - 62489441059.8
type i restriction enzyme m proteinSAMN04487924_10276Not AvailableNegative624881 - 62647060846.3
protein of unknown functionSAMN04487924_10277Not AvailableNegative626475 - 62723929680.6
helix-turn-helixSAMN04487924_10278Not AvailableNegative627247 - 6274688429.24
predicted nucleotide-binding protein containing tir-like domainSAMN04487924_10279Not AvailablePositive627606 - 62849333707.0
hypothetical proteinSAMN04487924_10280Not AvailableNegative629067 - 6293069388.66
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN04487924_10281Not AvailableNegative629329 - 63024036340.7
putative abc transport system atp-binding proteinSAMN04487924_10282Not AvailablePositive630396 - 63101622814.0

Displaying genes 421 – 430 of 4897 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.