Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamate kinase | SAMN05444680_101934 | Not Available | Negative | 979151 - 980104 | 33968.1 |
| ornithine carbamoyltransferase | SAMN05444680_101935 | Not Available | Negative | 980107 - 981111 | 37967.6 |
| arginine deiminase | SAMN05444680_101936 | Not Available | Negative | 981129 - 982352 | 45294.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444680_101937 | Not Available | Negative | 982382 - 983287 | 33004.1 |
| putrescine:ornithine antiporter, apa family | SAMN05444680_101938 | Not Available | Negative | 983303 - 984634 | 46086.0 |
| ornithine decarboxylase/arginine decarboxylase | SAMN05444680_101939 | Not Available | Negative | 984686 - 987061 | 89333.4 |
| arginine decarboxylase | SAMN05444680_101940 | Not Available | Negative | 987066 - 989330 | 82862.4 |
| hypothetical protein | SAMN05444680_101941 | Not Available | Negative | 989357 - 990727 | 49598.0 |
| transcriptional regulator, arac family | SAMN05444680_101942 | Not Available | Negative | 990858 - 991973 | 40746.8 |
| dimethylhistidine n-methyltransferase | SAMN05444680_101943 | Not Available | Negative | 992296 - 993276 | 36035.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
