Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid methyltransferase | SAMN05444680_101924 | Not Available | Positive | 970051 - 970617 | 21462.4 |
| ltxxq motif family protein | SAMN05444680_101925 | Not Available | Positive | 970726 - 971277 | 19021.3 |
| 4,5-dopa dioxygenase extradiol | SAMN05444680_101926 | Not Available | Negative | 971324 - 972229 | 32135.3 |
| conserved hypothetical protein | SAMN05444680_101927 | Not Available | Positive | 972547 - 973122 | 21523.5 |
| ion channel | SAMN05444680_101928 | Not Available | Negative | 973150 - 973482 | 11816.0 |
| protein of unknown function | SAMN05444680_101929 | Not Available | Negative | 973479 - 974522 | 36058.5 |
| multidrug resistance efflux pump | SAMN05444680_101930 | Not Available | Negative | 974532 - 975674 | 40660.5 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_101931 | Not Available | Negative | 975730 - 977307 | 57116.7 |
| predicted purr-regulated permease perm | SAMN05444680_101932 | Not Available | Negative | 977312 - 978442 | 38479.4 |
| vit family protein | SAMN05444680_101933 | Not Available | Negative | 978462 - 979100 | 23086.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
