Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101914 | Not Available | Negative | 957122 - 957895 | 28222.7 |
| type iv pilus assembly protein pily1 | SAMN05444680_101915 | Not Available | Negative | 958052 - 962419 | 149550.0 |
| pilx n-terminal | SAMN05444680_101916 | Not Available | Negative | 962474 - 963040 | 19054.5 |
| type iv pilus assembly protein pilw | SAMN05444680_101917 | Not Available | Negative | 963037 - 964131 | 38776.2 |
| type iv pilus assembly protein pilv | SAMN05444680_101918 | Not Available | Negative | 964128 - 964745 | 21618.1 |
| type iv fimbrial biogenesis protein fimt | SAMN05444680_101919 | Not Available | Negative | 964745 - 965254 | 17612.3 |
| type iv pilus assembly protein pile | SAMN05444680_101920 | Not Available | Negative | 965245 - 965661 | 15047.1 |
| fatty-acyl-coa synthase | SAMN05444680_101921 | Not Available | Positive | 965986 - 967848 | 65650.5 |
| putative flavoprotein involved in k+ transport | SAMN05444680_101922 | Not Available | Negative | 967849 - 969093 | 45490.0 |
| abc transporter | SAMN05444680_101923 | Not Available | Positive | 969307 - 969966 | 23294.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
