Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN05444680_101904 | Not Available | Negative | 948878 - 949321 | 15098.3 |
| hypothetical protein | SAMN05444680_101905 | Not Available | Negative | 949435 - 950175 | 27330.3 |
| uncharacterized conserved protein, duf427 family | SAMN05444680_101906 | Not Available | Negative | 950172 - 950453 | 10510.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_101907 | Not Available | Negative | 950608 - 951528 | 32426.4 |
| alcohol dehydrogenase, propanol-preferring | SAMN05444680_101908 | Not Available | Positive | 951721 - 952752 | 36116.9 |
| phenylacetate-coenzyme a ligase paak, adenylate-forming domain family | SAMN05444680_101909 | Not Available | Positive | 952778 - 954199 | 51380.5 |
| 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase | SAMN05444680_101910 | Not Available | Negative | 954212 - 954691 | 17149.3 |
| hypothetical protein | SAMN05444680_101911 | Not Available | Positive | 954954 - 955268 | 11568.7 |
| hypothetical protein | SAMN05444680_101912 | Not Available | Positive | 955284 - 955748 | 16231.8 |
| hypothetical protein | SAMN05444680_101913 | Not Available | Negative | 955803 - 957125 | 42949.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
