Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444680_101894 | Not Available | Positive | 938824 - 940194 | 48653.6 |
| protein of unknown function | SAMN05444680_101895 | Not Available | Positive | 940227 - 941324 | 39557.5 |
| hypothetical protein | SAMN05444680_101896 | Not Available | Negative | 941488 - 941892 | 15279.5 |
| outer membrane autotransporter barrel domain-containing protein | SAMN05444680_101897 | Not Available | Negative | 941978 - 944740 | 92498.4 |
| hypothetical protein | SAMN05444680_101898 | Not Available | Positive | 944985 - 945176 | 6668.42 |
| hypothetical protein | SAMN05444680_101899 | Not Available | Negative | 945193 - 946074 | 30541.1 |
| ribosomal protein s18 acetylase rimi | SAMN05444680_101900 | Not Available | Negative | 946093 - 946608 | 19033.7 |
| ferredoxin | SAMN05444680_101901 | Not Available | Positive | 946657 - 946938 | 10199.2 |
| transmembrane secretion effector | SAMN05444680_101902 | Not Available | Negative | 946935 - 948119 | 41300.9 |
| ribosomal large subunit pseudouridine synthase a | SAMN05444680_101903 | Not Available | Positive | 948230 - 948877 | 24185.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
