Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma subunit, ecf family | SAMN05444680_101874 | Not Available | Positive | 920500 - 921423 | 34584.4 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN05444680_101875 | Not Available | Negative | 921455 - 922408 | 33303.6 |
| cytochrome b561 | SAMN05444680_101876 | Not Available | Negative | 922437 - 923021 | 20992.0 |
| cytochrome c553 | SAMN05444680_101877 | Not Available | Negative | 923033 - 923581 | 20005.9 |
| pqq-dependent dehydrogenase, methanol/ethanol family | SAMN05444680_101878 | Not Available | Negative | 923713 - 925449 | 62685.8 |
| hypothetical protein | SAMN05444680_101879 | Not Available | Positive | 925680 - 926366 | 23585.2 |
| hypothetical protein | SAMN05444680_101880 | Not Available | Positive | 926569 - 926769 | 7588.07 |
| ribosome biogenesis gtpase a | SAMN05444680_101881 | Not Available | Negative | 926814 - 927770 | 34553.8 |
| transcriptional regulator, lyttr family | SAMN05444680_101882 | Not Available | Negative | 927826 - 928761 | 35333.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444680_101883 | Not Available | Positive | 928871 - 930058 | 44767.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
