Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN05444680_101864 | Not Available | Positive | 910472 - 911296 | 30020.1 |
| hypothetical protein | SAMN05444680_101865 | Not Available | Negative | 911409 - 911762 | 12309.5 |
| glutaminyl-trna synthetase | SAMN05444680_101866 | Not Available | Positive | 911900 - 913705 | 67493.4 |
| succinylglutamate desuccinylase / aspartoacylase family protein | SAMN05444680_101867 | Not Available | Negative | 913849 - 914778 | 33863.5 |
| type i restriction enzyme m protein | SAMN05444680_101868 | Not Available | Positive | 914932 - 916587 | 61924.3 |
| type i restriction enzyme, s subunit | SAMN05444680_101869 | Not Available | Positive | 916584 - 917762 | 43704.0 |
| transcriptional regulator, tetr family | SAMN05444680_101870 | Not Available | Negative | 917772 - 918380 | 22351.8 |
| snoal-like polyketide cyclase | SAMN05444680_101871 | Not Available | Negative | 918501 - 918920 | 15760.6 |
| predicted oxidoreductase | SAMN05444680_101872 | Not Available | Negative | 919014 - 920069 | 38177.7 |
| hypothetical protein | SAMN05444680_101873 | Not Available | Positive | 920214 - 920519 | 11546.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
