Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101854 | Not Available | Negative | 897013 - 897648 | 22474.1 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_101855 | Not Available | Negative | 897663 - 899135 | 51643.5 |
| multidrug efflux pump | SAMN05444680_101856 | Not Available | Negative | 899132 - 902395 | 116291.0 |
| multidrug efflux pump | SAMN05444680_101857 | Not Available | Negative | 902409 - 905567 | 111622.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444680_101858 | Not Available | Negative | 905583 - 906875 | 45733.8 |
| uncharacterized membrane protein | SAMN05444680_101859 | Not Available | Positive | 907093 - 907506 | 15309.3 |
| hypothetical protein | SAMN05444680_101860 | Not Available | Positive | 907559 - 908071 | 18201.2 |
| 2tm domain-containing protein | SAMN05444680_101861 | Not Available | Positive | 908099 - 908383 | 10177.5 |
| predicted dienelactone hydrolase | SAMN05444680_101862 | Not Available | Positive | 908380 - 909417 | 36033.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444680_101863 | Not Available | Positive | 909414 - 910475 | 38520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
