Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101844 | Not Available | Negative | 887450 - 887647 | 7295.71 |
| arac family transcriptional regulator | SAMN05444680_101845 | Not Available | Negative | 887734 - 888699 | 36264.3 |
| transcriptional regulator, padr family | SAMN05444680_101846 | Not Available | Positive | 888752 - 889333 | 20986.1 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05444680_101847 | Not Available | Positive | 889339 - 890175 | 30034.6 |
| hypothetical protein | SAMN05444680_101848 | Not Available | Positive | 890299 - 890802 | 19089.1 |
| dna mismatch repair protein muts | SAMN05444680_101849 | Not Available | Positive | 890915 - 893509 | 93751.4 |
| putative proteasome-type protease | SAMN05444680_101850 | Not Available | Positive | 893509 - 894375 | 32283.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_101851 | Not Available | Positive | 894524 - 895330 | 30106.5 |
| undecaprenyl-diphosphatase | SAMN05444680_101852 | Not Available | Negative | 895450 - 896274 | 29890.5 |
| fr47-like protein | SAMN05444680_101853 | Not Available | Negative | 896333 - 897010 | 24737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
