Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate lyase, pep mutase family | SAMN05444680_10129 | Not Available | Negative | 31831 - 32646 | 28603.8 |
| uncharacterized protein ypo0702 | SAMN05444680_10130 | Not Available | Positive | 32741 - 33379 | 22570.1 |
| hypothetical protein | SAMN05444680_10131 | Not Available | Negative | 33387 - 33836 | 16861.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05444680_10132 | Not Available | Negative | 33954 - 35174 | 44094.4 |
| fdhd protein | SAMN05444680_10133 | Not Available | Negative | 35260 - 36141 | 30761.3 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN05444680_10134 | Not Available | Negative | 36138 - 38462 | 85618.5 |
| cytosine/adenosine deaminase | SAMN05444680_10135 | Not Available | Negative | 38550 - 39944 | 49611.6 |
| hypothetical protein | SAMN05444680_10136 | Not Available | Negative | 39964 - 40716 | 25073.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10137 | Not Available | Negative | 40732 - 41718 | 33871.4 |
| transcriptional regulator, gntr family | SAMN05444680_10138 | Not Available | Positive | 41846 - 42565 | 26339.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
