Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine o-acetyltransferase | SAMN05444680_101834 | Not Available | Negative | 876327 - 877103 | 27839.4 |
| trna/rrna methyltransferase | SAMN05444680_101835 | Not Available | Negative | 877140 - 877904 | 27626.3 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444680_101836 | Not Available | Positive | 878046 - 879080 | 37075.9 |
| uncharacterized membrane protein yccc | SAMN05444680_101837 | Not Available | Positive | 879080 - 881329 | 80806.4 |
| lysr family transcriptional regulator, pca operon transcriptional activator | SAMN05444680_101838 | Not Available | Negative | 881330 - 882274 | 33475.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101839 | Not Available | Positive | 882448 - 883440 | 33908.4 |
| dna-binding transcriptional regulator, marr family | SAMN05444680_101840 | Not Available | Negative | 883465 - 883974 | 18742.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101841 | Not Available | Positive | 884090 - 885076 | 35201.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101842 | Not Available | Positive | 885103 - 886071 | 34240.5 |
| arylsulfatase a | SAMN05444680_101843 | Not Available | Positive | 886077 - 887393 | 49071.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
