Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a ethanolaminephosphotransferase | SAMN05444680_101824 | Not Available | Negative | 862299 - 864068 | 64331.3 |
| two-component system, ompr family, response regulator | SAMN05444680_101825 | Not Available | Positive | 864228 - 864905 | 24811.9 |
| two-component system, ompr family, sensor kinase | SAMN05444680_101826 | Not Available | Positive | 864902 - 866269 | 50007.6 |
| acyl-coa thioester hydrolase | SAMN05444680_101827 | Not Available | Negative | 866281 - 866703 | 15967.3 |
| hypothetical protein | SAMN05444680_101828 | Not Available | Negative | 866719 - 867501 | 27367.0 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05444680_101829 | Not Available | Positive | 867618 - 869315 | 61940.8 |
| 5-oxoprolinase (atp-hydrolysing) | SAMN05444680_101830 | Not Available | Negative | 869361 - 873158 | 134722.0 |
| sugar phosphate permease | SAMN05444680_101831 | Not Available | Negative | 873179 - 874462 | 45768.6 |
| uncharacterized protein ycsi, upf0317 family | SAMN05444680_101832 | Not Available | Negative | 874503 - 875318 | 29137.1 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101833 | Not Available | Negative | 875372 - 876277 | 33492.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
