Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN05444680_101814 | Not Available | Positive | 853123 - 853683 | 20932.5 |
| n-acyl-phosphatidylethanolamine-hydrolysing phospholipase d | SAMN05444680_101815 | Not Available | Positive | 853696 - 854745 | 39294.9 |
| dna-n1-methyladenine dioxygenase | SAMN05444680_101816 | Not Available | Negative | 854782 - 855429 | 23501.0 |
| hypothetical protein | SAMN05444680_101817 | Not Available | Negative | 855433 - 856143 | 26836.2 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05444680_101818 | Not Available | Negative | 856140 - 857222 | 39246.5 |
| glucans biosynthesis protein | SAMN05444680_101819 | Not Available | Positive | 857398 - 858996 | 59418.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444680_101820 | Not Available | Negative | 859009 - 859383 | 13005.8 |
| ethanolamine ammonia-lyase heavy chain | SAMN05444680_101821 | Not Available | Positive | 859503 - 860897 | 50103.3 |
| ethanolamine ammonia-lyase light chain | SAMN05444680_101822 | Not Available | Positive | 860894 - 861664 | 27751.3 |
| uncharacterized peroxidase-related enzyme | SAMN05444680_101823 | Not Available | Positive | 861696 - 862274 | 21788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
