Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444680_101804 | Not Available | Negative | 842668 - 844191 | 53790.9 |
| transcriptional regulator, lysr family | SAMN05444680_101805 | Not Available | Positive | 844293 - 845180 | 32939.8 |
| nicotinamidase-related amidase | SAMN05444680_101806 | Not Available | Negative | 845200 - 845817 | 21763.9 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05444680_101807 | Not Available | Positive | 845958 - 846932 | 35768.9 |
| hypothetical protein | SAMN05444680_101808 | Not Available | Negative | 846996 - 847256 | 8992.58 |
| polyphosphate:amp phosphotransferase | SAMN05444680_101809 | Not Available | Positive | 847533 - 848468 | 36383.7 |
| phosphate:na+ symporter | SAMN05444680_101810 | Not Available | Positive | 848507 - 850075 | 54118.6 |
| coa-transferase family iii | SAMN05444680_101811 | Not Available | Negative | 850092 - 851471 | 48279.4 |
| 3-oxoacid coa-transferase subunit b | SAMN05444680_101812 | Not Available | Negative | 851558 - 852196 | 22543.6 |
| 3-oxoacid coa-transferase subunit a | SAMN05444680_101813 | Not Available | Negative | 852198 - 852995 | 27862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
