Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05444680_101784 | Not Available | Negative | 820778 - 821809 | 37315.3 |
| peptide/nickel transport system substrate-binding protein | SAMN05444680_101785 | Not Available | Negative | 821829 - 823448 | 59536.7 |
| l-alanine-dl-glutamate epimerase | SAMN05444680_101786 | Not Available | Negative | 823583 - 824737 | 42221.3 |
| transcriptional regulator, gntr family | SAMN05444680_101787 | Not Available | Positive | 824839 - 825579 | 26892.7 |
| outer membrane protein (porin) | SAMN05444680_101788 | Not Available | Positive | 825704 - 826762 | 37337.7 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05444680_101789 | Not Available | Positive | 826857 - 828728 | 67434.1 |
| protein of unknown function | SAMN05444680_101790 | Not Available | Positive | 829184 - 830554 | 49574.5 |
| small gtp-binding protein domain-containing protein | SAMN05444680_101791 | Not Available | Positive | 830551 - 831966 | 51464.8 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444680_101792 | Not Available | Positive | 831974 - 832738 | 27494.6 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05444680_101793 | Not Available | Positive | 832802 - 833446 | 22868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
