Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101774 | Not Available | Positive | 811920 - 812918 | 34423.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101775 | Not Available | Positive | 812915 - 813928 | 36118.4 |
| gdsl-like lipase/acylhydrolase family protein | SAMN05444680_101776 | Not Available | Positive | 814255 - 814908 | 22222.6 |
| ribosomal protein s18 acetylase rimi | SAMN05444680_101777 | Not Available | Negative | 814905 - 815339 | 15690.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_101778 | Not Available | Negative | 815404 - 816294 | 32686.0 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN05444680_101779 | Not Available | Negative | 816339 - 817151 | 29687.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101780 | Not Available | Positive | 817242 - 818129 | 31771.4 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_101781 | Not Available | Negative | 818191 - 818955 | 27714.3 |
| peptide/nickel transport system atp-binding protein | SAMN05444680_101782 | Not Available | Negative | 818999 - 819586 | 21973.1 |
| peptide/nickel transport system permease protein | SAMN05444680_101783 | Not Available | Negative | 819870 - 820781 | 32310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
