Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05444680_101764 | Not Available | Positive | 801674 - 803077 | 50212.6 |
| hypothetical protein | SAMN05444680_101765 | Not Available | Negative | 803204 - 803653 | 16869.3 |
| lysm domain-containing protein | SAMN05444680_101766 | Not Available | Negative | 803650 - 804372 | 26975.3 |
| hypothetical protein | SAMN05444680_101767 | Not Available | Positive | 804504 - 804851 | 12088.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101768 | Not Available | Negative | 804886 - 805857 | 34369.5 |
| dihydroxy-acid dehydratase | SAMN05444680_101769 | Not Available | Negative | 805870 - 807582 | 59648.1 |
| predicted aconitase subunit 2 | SAMN05444680_101770 | Not Available | Negative | 807579 - 808043 | 16506.8 |
| predicted aconitase subunit 1 | SAMN05444680_101771 | Not Available | Negative | 808040 - 809335 | 47401.3 |
| transcriptional regulator, iclr family | SAMN05444680_101772 | Not Available | Negative | 809391 - 810233 | 29851.2 |
| fad dependent oxidoreductase | SAMN05444680_101773 | Not Available | Negative | 810306 - 811820 | 54458.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
