Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101754 | Not Available | Negative | 788765 - 789658 | 33048.5 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444680_101755 | Not Available | Positive | 789736 - 790620 | 29823.1 |
| regulatory protein, luxr family | SAMN05444680_101756 | Not Available | Positive | 790617 - 791000 | 13090.6 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444680_101757 | Not Available | Positive | 791008 - 792012 | 34030.7 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_101758 | Not Available | Negative | 792009 - 793163 | 43409.3 |
| hypothetical protein | SAMN05444680_101759 | Not Available | Negative | 793198 - 793926 | 26614.2 |
| dna polymerase iii, alpha subunit | SAMN05444680_101760 | Not Available | Negative | 794698 - 798069 | 125825.0 |
| protein imub | SAMN05444680_101761 | Not Available | Negative | 798062 - 799495 | 53091.8 |
| protein imua | SAMN05444680_101762 | Not Available | Negative | 799470 - 800264 | 27755.7 |
| aldo/keto reductase | SAMN05444680_101763 | Not Available | Positive | 800398 - 801423 | 36723.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
