Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444680_10119 | Not Available | Negative | 21900 - 22709 | 29068.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444680_10120 | Not Available | Negative | 22670 - 23662 | 34940.5 |
| hypothetical protein | SAMN05444680_10121 | Not Available | Positive | 23860 - 24642 | 27599.7 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444680_10122 | Not Available | Negative | 24650 - 25696 | 36155.1 |
| hypothetical protein | SAMN05444680_10123 | Not Available | Positive | 25763 - 26758 | 36806.4 |
| chromate transporter | SAMN05444680_10124 | Not Available | Positive | 26755 - 27945 | 42231.5 |
| superoxide dismutase, fe-mn family | SAMN05444680_10125 | Not Available | Positive | 27968 - 28720 | 27231.1 |
| superoxide dismutase, fe-mn family | SAMN05444680_10126 | Not Available | Positive | 28736 - 29398 | 24046.7 |
| hypothetical protein | SAMN05444680_10127 | Not Available | Positive | 29404 - 30447 | 38271.9 |
| lytic murein transglycosylase | SAMN05444680_10128 | Not Available | Positive | 30517 - 31812 | 46374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
