Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101724 | Not Available | Positive | 758025 - 758684 | 22828.6 |
| 4-oxalocrotonate tautomerase | SAMN05444680_101725 | Not Available | Negative | 758701 - 758901 | 7121.44 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_101726 | Not Available | Negative | 758940 - 759695 | 27410.6 |
| cupin-like domain-containing protein | SAMN05444680_101727 | Not Available | Negative | 759729 - 761021 | 48925.0 |
| hypothetical protein | SAMN05444680_101728 | Not Available | Negative | 761096 - 761239 | 4565.64 |
| hypothetical protein | SAMN05444680_101729 | Not Available | Negative | 761236 - 761868 | 22534.3 |
| two-component system, ompr family, response regulator | SAMN05444680_101730 | Not Available | Negative | 762006 - 762758 | 27153.8 |
| signal transduction histidine kinase | SAMN05444680_101731 | Not Available | Positive | 762949 - 765195 | 76840.7 |
| hypothetical protein | SAMN05444680_101732 | Not Available | Positive | 765270 - 766202 | 31325.4 |
| methyltransferase domain-containing protein | SAMN05444680_101733 | Not Available | Positive | 766284 - 766889 | 23112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
