Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g c-terminus | SAMN05444680_101714 | Not Available | Positive | 746168 - 746716 | 20343.1 |
| hypothetical protein | SAMN05444680_101715 | Not Available | Negative | 746695 - 747042 | 12784.3 |
| hypothetical protein | SAMN05444680_101716 | Not Available | Negative | 747162 - 748082 | 32785.5 |
| protein of unknown function | SAMN05444680_101717 | Not Available | Positive | 748266 - 749963 | 62064.4 |
| protein of unknown function | SAMN05444680_101718 | Not Available | Positive | 749998 - 751353 | 49728.6 |
| uncharacterized protein | SAMN05444680_101719 | Not Available | Positive | 751370 - 752449 | 37589.4 |
| hypothetical protein | SAMN05444680_101720 | Not Available | Positive | 752473 - 754920 | 87314.5 |
| acyl dehydratase | SAMN05444680_101721 | Not Available | Positive | 754946 - 755416 | 17309.7 |
| polyhydroxyalkanoate synthase | SAMN05444680_101722 | Not Available | Positive | 755413 - 757083 | 60856.2 |
| poly(3-hydroxyalkanoate) depolymerase | SAMN05444680_101723 | Not Available | Positive | 757080 - 757919 | 30314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
