Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN05444680_101704 | Not Available | Positive | 732777 - 733871 | 40561.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_101705 | Not Available | Positive | 734008 - 735081 | 39676.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101706 | Not Available | Negative | 735094 - 736020 | 32932.0 |
| formyl-coa transferase | SAMN05444680_101707 | Not Available | Positive | 736143 - 737393 | 43852.7 |
| hydroxymethylglutaryl-coa lyase | SAMN05444680_101708 | Not Available | Positive | 737390 - 738367 | 35035.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101709 | Not Available | Positive | 738411 - 739430 | 35444.0 |
| sgnh hydrolase-like domain-containing protein, acetyltransferase algx | SAMN05444680_101710 | Not Available | Negative | 739485 - 740507 | 38255.4 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN05444680_101711 | Not Available | Negative | 740516 - 742036 | 56498.5 |
| aaa atpase domain-containing protein | SAMN05444680_101712 | Not Available | Negative | 742147 - 745293 | 112815.0 |
| regulator of nucleoside diphosphate kinase | SAMN05444680_101713 | Not Available | Positive | 745751 - 746152 | 14650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
