Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN05444680_101694 | Not Available | Negative | 719887 - 724029 | 150351.0 |
| response regulator receiver modulated diguanylate cyclase | SAMN05444680_101695 | Not Available | Negative | 724038 - 725009 | 33923.4 |
| 2'-5' rna ligase | SAMN05444680_101696 | Not Available | Negative | 725040 - 725570 | 19930.2 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444680_101697 | Not Available | Positive | 725768 - 726889 | 39838.0 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444680_101698 | Not Available | Positive | 726898 - 728433 | 54892.6 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444680_101699 | Not Available | Positive | 728430 - 729416 | 33763.5 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444680_101700 | Not Available | Positive | 729425 - 730393 | 33198.8 |
| gluconolactonase | SAMN05444680_101701 | Not Available | Positive | 730436 - 731368 | 33949.6 |
| cupin-like domain-containing protein | SAMN05444680_101702 | Not Available | Positive | 731499 - 732464 | 36540.6 |
| Trna-gly | Not Available | Not Available | Positive | 732541 - 732611 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
