Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, iclr family | SAMN05444680_101684 | Not Available | Negative | 709074 - 709931 | 31401.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_101685 | Not Available | Negative | 709963 - 710826 | 29897.0 |
| cupin domain-containing protein | SAMN05444680_101686 | Not Available | Negative | 710836 - 711384 | 20529.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_101687 | Not Available | Negative | 711408 - 712226 | 28159.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101688 | Not Available | Negative | 712341 - 713321 | 33834.2 |
| mfs transporter, mhs family, citrate/tricarballylate:h+ symporter | SAMN05444680_101689 | Not Available | Positive | 713697 - 715010 | 46973.4 |
| polar amino acid transport system substrate-binding protein | SAMN05444680_101690 | Not Available | Positive | 715028 - 715777 | 25841.1 |
| ketopantoate reductase | SAMN05444680_101691 | Not Available | Negative | 715787 - 716803 | 35750.0 |
| alanyl-trna synthetase | SAMN05444680_101692 | Not Available | Negative | 716800 - 719436 | 94951.5 |
| protein of unknown function | SAMN05444680_101693 | Not Available | Positive | 719565 - 719921 | 12791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
