Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_101674 | Not Available | Negative | 700091 - 700522 | 15373.5 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05444680_101675 | Not Available | Negative | 700537 - 701571 | 39582.1 |
| hypothetical protein | SAMN05444680_101676 | Not Available | Negative | 701608 - 701826 | 7907.12 |
| hypothetical protein | SAMN05444680_101677 | Not Available | Negative | 701872 - 702204 | 12502.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101678 | Not Available | Negative | 702226 - 703221 | 34594.4 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444680_101679 | Not Available | Negative | 703233 - 704204 | 35508.9 |
| betaine-aldehyde dehydrogenase | SAMN05444680_101680 | Not Available | Negative | 704218 - 705693 | 52971.2 |
| aspartate dehydrogenase | SAMN05444680_101681 | Not Available | Negative | 705719 - 706522 | 26908.5 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444680_101682 | Not Available | Negative | 706537 - 708234 | 59235.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_101683 | Not Available | Negative | 708227 - 709066 | 29401.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
