Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN05444680_101664 | Not Available | Negative | 688816 - 689379 | 20587.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_101665 | Not Available | Positive | 689604 - 690593 | 34287.6 |
| co or xanthine dehydrogenase, mo-binding subunit | SAMN05444680_101666 | Not Available | Positive | 690746 - 693061 | 82055.1 |
| carbon-monoxide dehydrogenase medium subunit | SAMN05444680_101667 | Not Available | Positive | 693054 - 693935 | 31684.2 |
| carbon-monoxide dehydrogenase small subunit | SAMN05444680_101668 | Not Available | Positive | 693932 - 694408 | 16991.4 |
| carbon monoxide dehydrogenase subunit g | SAMN05444680_101669 | Not Available | Positive | 694398 - 695228 | 29667.7 |
| alanine-synthesizing transaminase | SAMN05444680_101670 | Not Available | Positive | 695340 - 696566 | 45139.5 |
| sugar phosphate permease | SAMN05444680_101671 | Not Available | Negative | 696601 - 697896 | 45622.6 |
| outer membrane protein (porin) | SAMN05444680_101672 | Not Available | Negative | 697928 - 699025 | 38357.5 |
| ferredoxin-nadp reductase | SAMN05444680_101673 | Not Available | Negative | 699096 - 700067 | 34766.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
