Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_101654 | Not Available | Negative | 679720 - 680421 | 25551.1 |
| transcriptional regulator, lysr family | SAMN05444680_101655 | Not Available | Positive | 680611 - 681522 | 32892.7 |
| hypothetical protein | SAMN05444680_101656 | Not Available | Positive | 681712 - 682782 | 39130.7 |
| glutamyl-q trna(asp) synthetase | SAMN05444680_101657 | Not Available | Positive | 682800 - 683714 | 33171.3 |
| trna (guanine-n(7)-)-methyltransferase | SAMN05444680_101658 | Not Available | Positive | 683711 - 684457 | 27856.5 |
| hypothetical protein | SAMN05444680_101659 | Not Available | Negative | 684486 - 684929 | 15476.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444680_101660 | Not Available | Positive | 685159 - 686346 | 40802.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444680_101661 | Not Available | Negative | 686442 - 687164 | 25955.7 |
| hypothetical protein | SAMN05444680_101662 | Not Available | Positive | 687259 - 687852 | 22788.8 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444680_101663 | Not Available | Positive | 687875 - 688642 | 27981.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
