Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactarate dehydratase | SAMN05444680_1423 | Not Available | Positive | 7362318 - 7362763 | 16083.4 |
| transposase | SAMN05444680_1431 | Not Available | Positive | 7362883 - 7363917 | 38343.7 |
| hypothetical protein | SAMN05444680_1441 | Not Available | Positive | 7364173 - 7364286 | 4301.34 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05444680_1442 | Not Available | Negative | 7364744 - 7365151 | 14715.6 |
| 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase | SAMN05444680_1451 | Not Available | Positive | 7365443 - 7365595 | 5421.31 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_1452 | Not Available | Positive | 7365645 - 7366580 | 32558.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | SAMN05444680_1453 | Not Available | Positive | 7366584 - 7366702 | 4258.19 |
| arginine:ornithine antiporter / lysine permease | SAMN05444680_1461 | Not Available | Positive | 7366703 - 7367950 | 45041.2 |
| arginine deiminase | SAMN05444680_1471 | Not Available | Negative | 7367953 - 7369130 | 43202.6 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | SAMN05444680_1481 | Not Available | Positive | 7369196 - 7370350 | 41642.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
