Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444680_1382 | Not Available | Negative | 7353712 - 7354206 | 17551.8 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444680_1383 | Not Available | Negative | 7354216 - 7355187 | 35296.6 |
| site-specific recombinase xerd | SAMN05444680_1391 | Not Available | Positive | 7355304 - 7356179 | 33064.4 |
| transposase zinc-binding domain-containing protein | SAMN05444680_1392 | Not Available | Positive | 7356190 - 7357374 | 44158.9 |
| hypothetical protein | SAMN05444680_1401 | Not Available | Negative | 7357728 - 7359320 | 56819.1 |
| electron transfer flavoprotein alpha subunit | SAMN05444680_1402 | Not Available | Negative | 7359419 - 7359499 | 2720.33 |
| site-specific recombinase xerd | SAMN05444680_1411 | Not Available | Positive | 7359618 - 7360493 | 32996.6 |
| putative transposase | SAMN05444680_1412 | Not Available | Positive | 7360503 - 7361178 | 24916.1 |
| hypothetical protein | SAMN05444680_1421 | Not Available | Positive | 7361179 - 7361292 | 4228.19 |
| 6-phosphogluconolactonase | SAMN05444680_1422 | Not Available | Positive | 7361295 - 7362305 | 35940.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
