Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444680_1351 | Not Available | Positive | 7332430 - 7333053 | 20869.1 |
| hypothetical protein | SAMN05444680_1352 | Not Available | Negative | 7333949 - 7334443 | 18151.1 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05444680_1353 | Not Available | Negative | 7334561 - 7335673 | 38598.3 |
| putative abc transport system substrate-binding protein | SAMN05444680_1354 | Not Available | Positive | 7336095 - 7337093 | 35331.0 |
| cytochrome c peroxidase | SAMN05444680_1355 | Not Available | Positive | 7337366 - 7338625 | 44432.7 |
| hypothetical protein | SAMN05444680_1356 | Not Available | Positive | 7338664 - 7340049 | 49435.0 |
| fmn-binding domain-containing protein | SAMN05444680_1357 | Not Available | Positive | 7340086 - 7340628 | 19673.6 |
| thiamine biosynthesis lipoprotein | SAMN05444680_1358 | Not Available | Positive | 7340640 - 7341488 | 30639.9 |
| hypothetical protein | SAMN05444680_1359 | Not Available | Positive | 7341581 - 7341943 | 13375.2 |
| pxpv repeat-containing protein | SAMN05444680_13510 | Not Available | Positive | 7342057 - 7342404 | 12805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
