Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | SAMN05444680_13415 | Not Available | Negative | 7324953 - 7325636 | 23999.7 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444680_13416 | Not Available | Negative | 7325660 - 7326259 | 22252.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_13417 | Not Available | Positive | 7326333 - 7327079 | 25702.9 |
| multiple antibiotic resistance protein | SAMN05444680_13418 | Not Available | Positive | 7327080 - 7327736 | 22948.9 |
| hypothetical protein | SAMN05444680_13419 | Not Available | Negative | 7327746 - 7328210 | 16556.1 |
| cholesterol transport system auxiliary component | SAMN05444680_13420 | Not Available | Negative | 7328236 - 7328889 | 22997.5 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05444680_13421 | Not Available | Negative | 7328900 - 7329886 | 34891.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN05444680_13422 | Not Available | Negative | 7329892 - 7330746 | 30244.9 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN05444680_13423 | Not Available | Negative | 7330749 - 7331912 | 42035.6 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05444680_13424 | Not Available | Positive | 7332095 - 7332429 | 11899.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
