Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN05444680_1019 | Not Available | Positive | 5648 - 6208 | 19085.8 |
| hypothetical protein | SAMN05444680_10110 | Not Available | Positive | 6292 - 7614 | 47797.8 |
| predicted atpase | SAMN05444680_10111 | Not Available | Negative | 7636 - 12975 | 197718.0 |
| hypothetical protein | SAMN05444680_10112 | Not Available | Negative | 12995 - 13720 | 26891.3 |
| sulfite reductase (nadph) flavoprotein alpha-component | SAMN05444680_10113 | Not Available | Negative | 13786 - 14574 | 29812.1 |
| phospholipase c | SAMN05444680_10114 | Not Available | Positive | 14703 - 17132 | 90428.7 |
| putative cardiolipin synthase | SAMN05444680_10115 | Not Available | Negative | 17133 - 18692 | 56582.5 |
| crp/fnr family transcriptional regulator, cyclic amp receptor protein | SAMN05444680_10116 | Not Available | Positive | 18836 - 19468 | 23291.2 |
| sugar phosphate permease | SAMN05444680_10117 | Not Available | Negative | 19485 - 20783 | 47255.6 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05444680_10118 | Not Available | Negative | 20867 - 21892 | 35890.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
