Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative serine protein kinase, prka | SAMN05444680_13317 | Not Available | Negative | 7296126 - 7298048 | 73446.4 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_13318 | Not Available | Negative | 7298554 - 7299540 | 34208.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_13319 | Not Available | Negative | 7299589 - 7300461 | 31562.7 |
| transcriptional regulator, gntr family | SAMN05444680_13320 | Not Available | Positive | 7300584 - 7301255 | 24748.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_13321 | Not Available | Positive | 7301410 - 7302399 | 34824.3 |
| molybdate transport system substrate-binding protein | SAMN05444680_13322 | Not Available | Positive | 7302396 - 7303088 | 23947.1 |
| molecular chaperone dnaj | SAMN05444680_13323 | Not Available | Negative | 7303081 - 7304211 | 40806.3 |
| molecular chaperone dnak | SAMN05444680_13324 | Not Available | Negative | 7304311 - 7306245 | 68945.9 |
| molecular chaperone grpe | SAMN05444680_13325 | Not Available | Negative | 7306353 - 7306919 | 19949.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444680_13326 | Not Available | Negative | 7307051 - 7307401 | 12232.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
