Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | SAMN05444680_1337 | Not Available | Positive | 7287210 - 7287734 | 19067.1 |
| 3'-5' exonuclease | SAMN05444680_1338 | Not Available | Negative | 7287747 - 7288370 | 22501.1 |
| s-formylglutathione hydrolase | SAMN05444680_1339 | Not Available | Negative | 7288371 - 7289237 | 31380.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_13310 | Not Available | Negative | 7289234 - 7290148 | 33209.4 |
| l-fuconolactonase | SAMN05444680_13311 | Not Available | Negative | 7290192 - 7291037 | 30902.9 |
| d-threo-aldose 1-dehydrogenase | SAMN05444680_13312 | Not Available | Negative | 7291099 - 7292121 | 36474.7 |
| 3-dehydroquinate dehydratase | SAMN05444680_13313 | Not Available | Positive | 7292189 - 7292644 | 16351.8 |
| dna-3-methyladenine glycosylase i | SAMN05444680_13314 | Not Available | Positive | 7292644 - 7293279 | 23772.3 |
| stage v sporulation protein spovr/ycgb, involved in spore cortex formation | SAMN05444680_13315 | Not Available | Negative | 7293295 - 7294812 | 59378.0 |
| hypothetical protein | SAMN05444680_13316 | Not Available | Negative | 7294809 - 7296101 | 49237.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
