Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system substrate-binding protein | SAMN05444680_13237 | Not Available | Negative | 7272184 - 7272543 | 13097.0 |
| transcriptional regulator, lysr family | SAMN05444680_13238 | Not Available | Negative | 7273438 - 7274334 | 32579.7 |
| beta-glucosidase | SAMN05444680_13239 | Not Available | Positive | 7274491 - 7276704 | 78762.1 |
| uronate dehydrogenase | SAMN05444680_13240 | Not Available | Positive | 7276777 - 7277033 | 8952.85 |
| putative atp-dependent endonuclease of the old family | SAMN05444680_1331 | Not Available | Negative | 7277230 - 7278987 | 62563.2 |
| parb/repb/spo0j family partition protein | SAMN05444680_1332 | Not Available | Positive | 7279317 - 7280267 | 33788.4 |
| dna repair photolyase | SAMN05444680_1333 | Not Available | Positive | 7280304 - 7281203 | 33610.6 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444680_1334 | Not Available | Negative | 7281154 - 7282611 | 51348.6 |
| rnd family efflux transporter, mfp subunit | SAMN05444680_1335 | Not Available | Negative | 7282724 - 7283932 | 43151.8 |
| multidrug efflux pump subunit acrb | SAMN05444680_1336 | Not Available | Negative | 7283937 - 7287107 | 112112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
