Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase | SAMN05444680_13227 | Not Available | Positive | 7262923 - 7263852 | 32540.6 |
| hypothetical protein | SAMN05444680_13228 | Not Available | Positive | 7263849 - 7264244 | 14333.3 |
| acyl dehydratase | SAMN05444680_13229 | Not Available | Positive | 7264273 - 7264749 | 17790.2 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444680_13230 | Not Available | Positive | 7264746 - 7265975 | 43563.2 |
| shikimate dehydrogenase | SAMN05444680_13231 | Not Available | Positive | 7265988 - 7266809 | 29142.2 |
| 3-dehydroquinate dehydratase | SAMN05444680_13232 | Not Available | Positive | 7266828 - 7267271 | 16073.3 |
| transcriptional regulator, arac family | SAMN05444680_13233 | Not Available | Negative | 7267739 - 7268596 | 30774.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444680_13234 | Not Available | Positive | 7268822 - 7269691 | 31163.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_13235 | Not Available | Positive | 7269703 - 7270485 | 26943.4 |
| imidazolonepropionase | SAMN05444680_13236 | Not Available | Positive | 7270550 - 7271890 | 49051.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
