Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni,fe-hydrogenase iii small subunit | SAMN05444680_13217 | Not Available | Positive | 7252800 - 7253327 | 18848.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05444680_13218 | Not Available | Positive | 7253514 - 7253879 | 12630.3 |
| succinate dehydrogenase subunit b | SAMN05444680_13219 | Not Available | Negative | 7254243 - 7254941 | 26387.2 |
| transcriptional regulator, lysr family | SAMN05444680_13220 | Not Available | Negative | 7255755 - 7256639 | 31721.5 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN05444680_13221 | Not Available | Positive | 7256808 - 7258163 | 47035.0 |
| vanillate o-demethylase ferredoxin subunit | SAMN05444680_13222 | Not Available | Positive | 7258214 - 7259191 | 35645.2 |
| vanillate o-demethylase monooxygenase subunit | SAMN05444680_13223 | Not Available | Positive | 7259214 - 7260323 | 41399.2 |
| protocatechuate 4,5-dioxygenase beta subunit | SAMN05444680_13224 | Not Available | Positive | 7260334 - 7261176 | 31510.5 |
| protocatechuate 4,5-dioxygenase alpha subunit | SAMN05444680_13225 | Not Available | Positive | 7261173 - 7261532 | 14025.8 |
| transcriptional regulator, lysr family | SAMN05444680_13226 | Not Available | Negative | 7261864 - 7262820 | 34841.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
